Unify the metrics implementation between low-level and high-level API. by qingqing01 · Pull Request #26158 · PaddlePaddle/Paddle

qingqing01 · 2020-08-11T10:49:45Z

PR types

Function optimization

PR changes

APIs

Describe

Unify the metrics implementation between low-level and high-level API.
Change function name add_metric_op in Metric to compute.
Return scalar, not [scalar] in update() and accumulate() of Accuracy.
Refine and add comments for sub-function in Accuracy.
- Add comments for compute, update, reset..
- Add standalone usage and usage with Model API for Metrics
Add unit testing in python/paddle/tests

test=develop

paddle-bot-old · 2020-08-11T10:49:51Z

Thanks for your contribution!
Please wait for the result of CI firstly. See Paddle CI Manual for details.

paddle-bot-old · 2020-08-11T10:49:53Z

✅ This PR's description meets the template requirements!
Please wait for other CI results.

… hapi_metrics

heavengate · 2020-08-17T09:37:31Z

python/paddle/metric/metrics.py

可以调一下缩进对齐一下~

test=develop

saxon-zh · 2020-08-17T11:14:38Z

python/paddle/incubate/hapi/model.py

                and test mode.
-            loss_function (Loss|callable function|None): Loss function can
+            loss (Loss|callable function|None): Loss function can
                be a `fluid.dygraph.Layer` instance or any callable function


fluid.dygraph.Layer => paddle.nn.Layer ，下面用到fluid.dygraph.Layer的地方同样都需要修改一下

saxon-zh · 2020-08-17T11:15:48Z

python/paddle/incubate/hapi/model.py

            print(result)

            # imperative mode
            fluid.enable_dygraph()


fluid.enable_dygraph => paddle.disable_static

guoshengCS · 2020-08-17T11:10:09Z

python/paddle/metric/metrics.py

+
+    Args:
+        name (str, optional): String name of the metric instance.
+            Default is `precision`.


这里name默认值是否应是recall呢

guoshengCS · 2020-08-17T11:14:52Z

python/paddle/metric/metrics.py

+
+    Args:
+        name (str, optional): String name of the metric instance. Default
+            is `acc`.


这里name默认值是否应是 auc 呢

guoshengCS · 2020-08-17T11:16:32Z

python/paddle/metric/metrics.py

+        name (str, optional): String name of the metric instance. Default
+            is `acc`.
+        curve (str): Specifies the mode of the curve to be computed,
+            'ROC' or 'PR' for the Precision-Recall-curve. Default is 'ROC'.


Maybe add doc for num_thresholds later

saxon-zh · 2020-08-17T11:17:15Z

python/paddle/metric/metrics.py

+        .. code-block:: python
+            def compute(pred, label):
+                # sort prediction and slice the top-5 scores
+                pred = fluid.layers.argsort(pred, descending=True)[1][:, :5]


argsort用paddle.下面的API，去掉fluid

saxon-zh · 2020-08-17T11:17:27Z

python/paddle/metric/metrics.py

+                pred = fluid.layers.argsort(pred, descending=True)[1][:, :5]
+                # calculate whether the predictions are correct
+                correct = pred == label
+                return fluid.layers.cast(correct, dtype='float32')


去掉fluid

saxon-zh · 2020-08-17T11:18:40Z

python/paddle/metric/metrics.py

+class Accuracy(Metric):
+    """
+    Encapsulates accuracy metric logic.
+    def __init__(self, topk=(1, ), name='acc', *args, **kwargs):


没用的信息吧？

Removed. Thanks!

saxon-zh · 2020-08-17T11:21:38Z

python/paddle/metric/metrics.py

+        import paddle
+
+        paddle.disable_static()
+        x = paddle.to_variable(np.array([


to_variable => to_tensor

saxon-zh · 2020-08-17T11:21:50Z

python/paddle/metric/metrics.py

+            [0.1, 0.4, 0.3, 0.2],
+            [0.1, 0.2, 0.4, 0.3],
+            [0.1, 0.2, 0.3, 0.4]]))
+        y = paddle.to_variable(np.array([[0], [1], [2], [3]]))


saxon-zh · 2020-08-17T11:22:04Z

python/paddle/metric/metrics.py

+        .. code-block:: python
+
+        import paddle
+        import paddle.fluid as fluid


去掉fluid

saxon-zh · 2020-08-17T11:23:17Z

python/paddle/metric/metrics.py

+        train_dataset = hapi.datasets.MNIST(mode='train')
+
+        model = hapi.Model(hapi.vision.LeNet(classifier_activation=None))
+        optim = fluid.optimizer.Adam(


paddle.optimizer.Adam

test=develop

… hapi_metrics

… hapi_metrics test=develop

… hapi_metrics

test=develop

jzhang533 · 2020-08-20T10:25:17Z

python/paddle/metric/__init__.py

-
-
-
-from ..fluid.metrics import Accuracy, Auc, ChunkEvaluator, CompositeMetric, DetectionMAP, EditDistance, \


paddle/fluid/metrics.py 里的API计划怎么处理？
还有ChunkEvaluator, CompositeMetric, DetectionMAP, EditDistance在重构后的paddle.metric下没有对应的API。

@XiaoguangHu01 晓光麻烦看看__init__.py文件的改动。

相关被使用统计在agroup中。 DetectionMAP、EditDistance建议先废弃，相关套件已在模型里重新实现。Precision/Recall当前没有被任何模型使用到，当前fluid下面的实现还太简单。会上讨论，本次PR先以统一位置为主，后续版本还需要增强相关功能，包括增加ChunkEvaluator,以及改进功能。

计划废弃的API都添加一下deprecated decorator吧。

jzhang533 · 2020-08-20T10:25:23Z

python/paddle/metric/__init__.py

+from . import metrics

 from ..fluid.layers.metric_op import accuracy, auc
 from ..fluid.layers.nn import chunk_eval, cos_sim, mean_iou


paddle.metric下的class形式API，跟小写的调用op的API的关系，是否讨论过啊？

class形式: 提供batch累积功能。一般用于高层API。底层API也可以使用。参考内部wiki记录。

function(op形式): 保留了fluid下面的api，一般用于底层API。

Accuracy: 只支持当前batch的统计，需用户做batch累积计算。底层API可以使用。

auc: 可计算batch和累积batch的auc。 PaddleRec中使用。

jzhang533 · 2020-08-20T10:29:22Z

python/paddle/metric/metrics.py

+        model.prepare(
+            optim,
+            loss=nn.BCELoss(),
+            metrics=paddle.metric.Recall())


这里给一个可以同时计算precison和recall的例子？
通常情况下会同时算这两个指标的。

@jzhang533 Precision和Recall的功能会上讨论后续的版本还需增强，见上面回复，本次先以统一为主。所以后续可以增强下。

我看model.prepare的metrics是可以接受list的，这里改一下是否就可以？（先不考虑运行效率问题）

@jzhang533 Done. Thanks!

jzhang533 · 2020-08-20T10:31:00Z

tools/wlist.json

+        "Auc.update",
+        "Auc.accumulate",
+        "Auc.name",
+        "Auc.compute",


同意这次对于白名单的改动。因为在class Auc等的地方已经有了示例代码。

test=develop

XiaoguangHu01

LTGM

jzhang533

lgtm
will have follow up pr to deprecate fluid apis.

saxon-zh

LGTM

… hapi_metrics

test=develop

qingqing01 · 2020-08-24T03:32:29Z

Fix sample code about Adam, since #26288 is merged.

@XiaoguangHu01 @raindrops2sea @jzhang533 @saxon-zh Please help to review again.

saxon-zh

LGTM

XiaoguangHu01

LGTM

jzhang533

lgtm

qingqing01 added 2 commits August 10, 2020 10:14

Refine paddle/metrics

16974da

Move paddle/incubate/hapi/metrics to paddle/metric

43d8b64

test=develop

qingqing01 added 3 commits August 15, 2020 10:19

Add Precision, Recall and Auc metric

ad32568

Update unit testing

20b4936

Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle into…

1d7dce5

… hapi_metrics

qingqing01 requested review from LielinJiang, XiaoguangHu01, guoshengCS, heavengate and saxon-zh August 17, 2020 07:55

qingqing01 force-pushed the hapi_metrics branch from 12bab82 to 3659013 Compare August 17, 2020 09:31

LielinJiang previously approved these changes Aug 17, 2020

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heavengate reviewed Aug 17, 2020

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Update code to latest develop

6b9e9d7

test=develop

qingqing01 dismissed LielinJiang’s stale review via 6b9e9d7 August 17, 2020 09:45

qingqing01 force-pushed the hapi_metrics branch from 3659013 to 6b9e9d7 Compare August 17, 2020 09:45

Follow comments

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test=develop

heavengate previously approved these changes Aug 17, 2020

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saxon-zh reviewed Aug 17, 2020

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guoshengCS previously approved these changes Aug 17, 2020

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saxon-zh reviewed Aug 17, 2020

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qingqing01 dismissed stale reviews from guoshengCS and heavengate via 362d914 August 18, 2020 04:22

qingqing01 added 10 commits August 18, 2020 04:27

--amend

562bd14

Fix unit testing after updating API

e2dd416

test=develop

Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle into…

c30a961

… hapi_metrics

Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle into…

4faabe3

… hapi_metrics test=develop

Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle into…

6d66305

… hapi_metrics

Update test_metrics

180a95f

Enhance unit testing

08308fd

test=develop

Fix code style

52b9f20

test=develop

Fix sample code

24c3849

test=develop

Merge branch 'develop' into hapi_metrics

15420d8

jzhang533 reviewed Aug 20, 2020

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Update code sample in metric.Recall

553cb01

test=develop

XiaoguangHu01 previously approved these changes Aug 21, 2020

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jzhang533 previously approved these changes Aug 22, 2020

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raindrops2sea previously approved these changes Aug 23, 2020

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saxon-zh previously approved these changes Aug 23, 2020

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qingqing01 added 2 commits August 24, 2020 03:18

Merge branch 'develop' of https://github.com/PaddlePaddle/Paddle into…

d5c31c0

… hapi_metrics

Fix code sample about Adam after develop code is updated

0fb112c

test=develop

qingqing01 dismissed stale reviews from saxon-zh, raindrops2sea, jzhang533, and XiaoguangHu01 via 0fb112c August 24, 2020 03:29

saxon-zh approved these changes Aug 24, 2020

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raindrops2sea approved these changes Aug 24, 2020

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XiaoguangHu01 approved these changes Aug 24, 2020

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jzhang533 approved these changes Aug 24, 2020

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qingqing01 merged commit 78ca8cf into PaddlePaddle:develop Aug 24, 2020




		from ..fluid.metrics import Accuracy, Auc, ChunkEvaluator, CompositeMetric, DetectionMAP, EditDistance, \

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